Sabina - I've been looking at this for awhile but nothing jumps out to me in the files you provided. I am assuming that both projects are using the same CCS version and compiler versions in addition to the XDC and SYS/BIOS versions. It should give you the same output. I'm not sure what more I can do with the information and files you gave me. I'll need the generated output for both projects (out files, map files, obj, pp). If I can get both projects and all source, that would be best though I know this can be tricky to provide.
I understand that providing such files is sensitive given the IP. If you can provide them and would like to do so privately, please send me a private message.
Thanks for your patience
ki